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«QDex : A database profiler for generic bio-data exploration and quality aware integration F. Moussouni1, L. Berti-Équille 2, G. Rozé1, O. Loréal, ...»

-- [ Page 3 ] --

3. Do, H.-H. and Rahm, E., Flexible Integration of Molecular-biological Annotation Data: The GenMapper Approach, Proc. of the Intl. Conf. EDBT'04, Heraklion, Greece, Springer LNCS, 2004.

4. Guérin E., Marquet G., Burgun A., Loréal O., Berti-Equille L., Leser U., Moussouni F., Integrating and Warehousing Liver Gene Expression Data and Related Biomedical Resources in GEDAW, Proc. of the 2nd Intl. Workshop on Data Integration in the Life Science (DILS), San Diego, 2005.

5. Guérin E., Marquet G., Chabalier J., Troadec M.B., Guguen-Guillouzo C., Loréal O., Burgun A., Moussouni F., Combining biomedical knowledge and transcriptomic data to extract new knowledge on genes, Journal of Integrative Bioinformatics, 3(2) 2006.

6. Harris MA et. al. Gene Ontology Consortium. The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D258-61.

7. Bodenreider O. The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D267-70.

8. Lacroix, Z., Critchlow, T., (Ed.), Bioinformatics: Managing Scientific Data, Morgan Kaufmann, 2003.

9. Martinez A., Hammer, J. Making Quality Count in Biological Data Sources. Proc. of the 2nd Intl.

ACM Workshop on Information Quality in Information Systems (IQIS 2005), USA, June 2004.

10. Müller H., Leser U., Freytag J.-C., Mining for Patterns in Contradictory Data. Proc. of the 1rst Intl.

ACM Workshop on Information Quality in Information Systems (IQIS 2004), p. 51-58, France, June 2004.

11. Müller, H., Naumann, F., Freytag J.-C. Data Quality in Genome Databases. Proc. of Conference on Information Quality (ICIQ’03), p. 269-284, MIT, USA, 2003.

12. Overton,C.G. and Haas,J. Case-Based Reasoning Driven Gene Annotation. Computational Methods in MolecularBiology. Elsevier Science, 1998.

13. Rahm E., Do H., Data Cleaning: Problems and Current Approaches, IEEE Data Eng. Bull. 23(4): 3Thanaraj, T.A. A clean data set of EST-confirmed splice sites from Homo sapiens and standards for clean-up procedures. Nucleic Acids Res. 27(13), 2627-2637, 1999.

15. Wang R. Y., Journey to Data Quality, Advances in Database Systems, Vol. 23, Kluwer Academic Press, Boston, 2002.

16. Wang, R., Kon, H. & Madnick, S. (1993), Data Quality Requirements Analysis and Modelling, Ninth International Conference of Data Engineering, Vienna, Austria. Article

17. Pyle D., Data Preparation for Data Mining, Morgan Kaufmann, 1999.

18. Durinck S, Moreau Y, Kasprzyk A, Davis S, De Moor B, Brazma A, Huber W, BioMart and BioConductor: a powerful link between biological databases and microarray data analysis.

Bioinformatics. 2005 Aug 15; 21(16):3439-40.



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